BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011B04SP1|AL426155
(809 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1668 1546 0.0
>3x_Contig1668
Length = 13429
Score = 1546 bits (776), Expect = 0.0
Identities = 799/808 (98%), Gaps = 1/808 (0%)
Strand = Plus / Plus
Query: 3 tcaggccctatttatccacatttgckacaacaacaacaacaaatagtgatcgabaattcg 62
||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 702 tcaggccctatttttccacatttgcaacaacaacaacaacaaatagtgatcgaaaattcg 761
Query: 63 aagatcgattacgatgccgaggcaaagaagttagaggacaaagccagcvggtttttggca 122
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 762 aagatcgattacgatgccgaggcaaagaagttagaggacaaagccagcaggtttttggca 821
Query: 123 aaacagacgcaccctgttatcattccttcatttgctgcctggtttgattttgatgatatc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 aaacagacgcaccctgttatcattccttcatttgctgcctggtttgattttgatgatatc 881
Query: 183 catgaattggaaagaagagcgttgccaagttttttcaacgaatcgtctcgtttcaagact 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 catgaattggaaagaagagcgttgccaagttttttcaacgaatcgtctcgtttcaagact 941
Query: 243 ccaaaggcgtataaggrtgttaggwattttatgataaacacatataggttgtctccttat 302
|||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 942 ccaaaggcgtataaggatgttaggaattttatgataaacacatataggttgtctccttat 1001
Query: 303 gaatacttgacagtgactgccatcagaagaaatattgctatggatgtggcatctgttttg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 gaatacttgacagtgactgccatcagaagaaatattgctatggatgtggcatctgttttg 1061
Query: 363 aaaattcatcagtttttggagaaatggggtctaattaattatcaaatagatccaagatct 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1062 aaaattcatcagtttttggagaaatggggtctaattaattatcaaatagatccaagatct 1121
Query: 423 aaaccatcacttgttggtcctagttttaccggtcatttccaggtggtacttgatacacct 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1122 aaaccatcacttgttggtcctagttttaccggtcatttccaggtggtacttgatacacct 1181
Query: 483 caaggtttgavaccgttcgtaccaccagaggttactgaggccgaaacgactcccgta-ga 541
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1182 caaggtttgaaaccgttcgtaccaccagaggttactgaggccgaaacgactcccgtagga 1241
Query: 542 tcaacgcctgccgtagcagatgatgctgcgaatgccacagcggagtctgcagatgataac 601
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1242 tcaacgcctgcagtagcagatgatgctgcgaatgccacagcggagtctgcagatgataac 1301
Query: 602 aaagaggaaaagaaattggaattcaaacgtccagagccattcccagtcaatctttcttta 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1302 aaagaggaaaagaaattggaattcaaacgtccagagccattcccagtcaatctttcttta 1361
Query: 662 agaaaaaatgtctatgatacaatccatgacttcaatgctttacgtcaactcaatttacaa 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1362 agaaaaaatgtctatgatacaatccatgacttcaatgctttacgtcaactcaatttacaa 1421
Query: 722 gcaaggcaaatcaataaacaatacgtatgcttcagttgtggtaacgatgccactacaatt 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1422 gcaaggcaaatcaataaacaatacgtatgcttcagttgtggtaacgatgccactacaatt 1481
Query: 782 cgctaccataatctaagatccaaaaatg 809
||||||||||||||||||||||||||||
Sbjct: 1482 cgctaccataatctaagatccaaaaatg 1509
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7087
Number of Sequences: 1807
Number of extensions: 7087
Number of successful extensions: 331
Number of sequences better than 1.0e-20: 1
length of query: 809
length of database: 10,358,551
effective HSP length: 16
effective length of query: 793
effective length of database: 10,329,639
effective search space: 8191403727
effective search space used: 8191403727
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)